Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07325
Experiment: 24hr PHYTO6 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO6 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,660,616 | - | -0.4 | |||
1,661,408 | - | BPHYT_RS07320 | 0.83 | -3.1 | |
1,661,907 | - | BPHYT_RS07325 | 0.44 | -0.5 | |
1,662,361 | - | -0.6 | |||
1,662,476 | + | +1.8 | |||
1,662,908 | - | BPHYT_RS07330 | 0.39 | +1.1 | |
1,662,908 | - | BPHYT_RS07330 | 0.39 | +0.5 | |
1,662,908 | - | BPHYT_RS07330 | 0.39 | -0.1 | |
1,662,957 | - | BPHYT_RS07330 | 0.44 | -1.1 | |
1,663,270 | - | BPHYT_RS07330 | 0.78 | -0.2 | |
1,663,270 | - | BPHYT_RS07330 | 0.78 | +0.6 | |
1,663,270 | - | BPHYT_RS07330 | 0.78 | -0.7 |
Or see this region's nucleotide sequence