Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05675

Experiment: 24hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO6 MOI 1
1,295,274	-		BPHYT_RS05670	0.35	-0.5
1,295,291	-		BPHYT_RS05670	0.37	+0.8
1,295,324	-		BPHYT_RS05670	0.39	-1.9
1,295,432	-		BPHYT_RS05670	0.49	+1.3
1,295,607	-		BPHYT_RS05670	0.64	+0.3
1,295,802	-		BPHYT_RS05670	0.81	+4.6
1,295,802	-		BPHYT_RS05670	0.81	+0.3
1,295,850	+		BPHYT_RS05670	0.86	-0.7
1,295,850	+		BPHYT_RS05670	0.86	-0.9
1,295,851	-		BPHYT_RS05670	0.86	-0.2
1,295,959	+				+0.1
1,296,011	+				+1.0
1,296,209	-		BPHYT_RS05675	0.20	-1.4
1,296,209	-		BPHYT_RS05675	0.20	-0.0
1,296,228	+		BPHYT_RS05675	0.22	+0.2
1,296,228	+		BPHYT_RS05675	0.22	+1.7
1,296,232	+		BPHYT_RS05675	0.23	+1.1
1,296,233	-		BPHYT_RS05675	0.23	-1.6
1,296,233	-		BPHYT_RS05675	0.23	-0.0
1,296,233	-		BPHYT_RS05675	0.23	+1.0
1,296,354	+		BPHYT_RS05675	0.35	+0.2
1,296,538	+		BPHYT_RS05675	0.53	-1.4
1,296,635	-				+0.3
1,296,635	-		BPHYT_RS05675	0.63	+2.3
1,296,750	-		BPHYT_RS05675	0.74	-0.8
1,296,816	+		BPHYT_RS05675	0.80	+1.0
1,296,925	+				-0.5
1,296,926	-				-1.5
1,297,068	+				-0.0