Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04610

Experiment: 24hr PHYTO6 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO6 MOI 1
1,066,642	-		BPHYT_RS04605	0.24	-0.4
1,066,642	-		BPHYT_RS04605	0.24	-0.7
1,066,652	+		BPHYT_RS04605	0.25	+0.9
1,066,740	+		BPHYT_RS04605	0.34	+0.1
1,066,740	+		BPHYT_RS04605	0.34	+1.6
1,066,792	+		BPHYT_RS04605	0.39	-1.0
1,066,867	+		BPHYT_RS04605	0.46	-0.0
1,066,867	+		BPHYT_RS04605	0.46	+0.4
1,066,867	+		BPHYT_RS04605	0.46	-0.8
1,066,868	-		BPHYT_RS04605	0.46	-0.7
1,067,078	-		BPHYT_RS04605	0.66	-0.1
1,067,078	-		BPHYT_RS04605	0.66	-0.5
1,067,078	-		BPHYT_RS04605	0.66	-0.1
1,067,184	+		BPHYT_RS04605	0.76	-0.9
1,067,194	+		BPHYT_RS04605	0.77	-0.3
1,067,195	-		BPHYT_RS04605	0.77	-1.0
1,067,195	-		BPHYT_RS04605	0.77	+0.3
1,067,498	-				+0.7
1,067,612	+		BPHYT_RS04610	0.11	-0.1
1,067,612	+		BPHYT_RS04610	0.11	-1.3
1,068,194	+		BPHYT_RS04610	0.63	+0.4
1,068,195	-		BPHYT_RS04610	0.64	-1.3
1,068,596	+				+0.5
1,068,646	-				+0.8
1,069,120	+		BPHYT_RS04615	0.28	+0.4
1,069,374	-		BPHYT_RS04615	0.56	+0.9
1,069,456	+		BPHYT_RS04615	0.66	-0.9
1,069,520	+		BPHYT_RS04615	0.73	+3.3
1,069,521	-		BPHYT_RS04615	0.73	-1.6
1,069,580	+		BPHYT_RS04615	0.80	-0.0