Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33190

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
3,023,609	-				+1.4
3,023,609	-				-1.1
3,023,766	+				-1.5
3,023,767	-				+0.2
3,023,887	-				-0.5
3,024,006	+				+1.5
3,024,007	-				+0.3
3,024,029	+				-0.4
3,024,052	-				-0.3
3,024,137	+				-1.5
3,024,144	-				-1.3
3,024,257	+				-1.1
3,024,258	-				+0.7
3,024,275	+				-0.7
3,024,275	+				-1.0
3,024,275	+				-0.4
3,024,277	+				-0.3
3,024,277	+				-2.3
3,024,316	+				+0.0
3,024,316	+				-0.6
3,024,317	-				+0.7
3,024,458	+				-0.5
3,024,458	+				+0.6
3,024,511	+				+0.3
3,024,798	-		BPHYT_RS33190	0.14	+1.0
3,024,930	-		BPHYT_RS33190	0.23	+0.7
3,024,930	-		BPHYT_RS33190	0.23	-0.2
3,024,981	+		BPHYT_RS33190	0.26	-1.8
3,025,065	-		BPHYT_RS33190	0.32	-0.8
3,025,065	-		BPHYT_RS33190	0.32	-0.2
3,025,136	+		BPHYT_RS33190	0.36	-1.7
3,025,228	+		BPHYT_RS33190	0.43	+0.0
3,025,340	-		BPHYT_RS33190	0.50	-0.4
3,025,383	+		BPHYT_RS33190	0.53	+0.0
3,025,383	+		BPHYT_RS33190	0.53	+1.3
3,025,384	-		BPHYT_RS33190	0.53	-0.3
3,025,384	-		BPHYT_RS33190	0.53	-1.5
3,025,384	-		BPHYT_RS33190	0.53	-0.1
3,025,495	+		BPHYT_RS33190	0.61	-1.2
3,025,553	+		BPHYT_RS33190	0.65	-0.2
3,025,553	+		BPHYT_RS33190	0.65	+0.3
3,025,554	-		BPHYT_RS33190	0.65	+1.2
3,025,598	+		BPHYT_RS33190	0.68	-1.2
3,025,820	+		BPHYT_RS33190	0.83	-2.4
3,025,823	-		BPHYT_RS33190	0.83	+1.3
3,025,946	+				-1.3
3,025,951	-				-2.0
3,025,951	-				-0.2
3,026,076	-				+0.3
3,026,153	-				-2.1
3,026,153	-				+0.9
3,026,573	+				+0.6
3,026,606	+				-2.3
3,026,617	-				-0.5
3,026,624	+				+0.2
3,026,627	-				+2.1
3,026,974	+		BPHYT_RS33200	0.28	-1.8
3,026,978	+		BPHYT_RS33200	0.29	-0.3
3,026,994	-		BPHYT_RS33200	0.30	+0.2
3,027,000	-		BPHYT_RS33200	0.30	+0.2