Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31180

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
2,552,871	+		BPHYT_RS31175	0.28	+1.0
2,552,872	-		BPHYT_RS31175	0.28	-0.2
2,552,982	-		BPHYT_RS31175	0.37	-1.0
2,552,982	-		BPHYT_RS31175	0.37	+0.1
2,552,982	-		BPHYT_RS31175	0.37	-1.0
2,553,010	+		BPHYT_RS31175	0.39	-1.5
2,553,010	+		BPHYT_RS31175	0.39	+1.0
2,553,011	-		BPHYT_RS31175	0.39	-0.1
2,553,055	+		BPHYT_RS31175	0.43	-0.7
2,553,055	+		BPHYT_RS31175	0.43	+1.7
2,554,142	-				+0.1
2,554,157	-				+1.7
2,554,194	-				+3.0
2,554,198	+				+0.4
2,554,198	+				-0.0
2,554,199	-				-2.1
2,554,390	+		BPHYT_RS31185	0.11	+0.4
2,554,390	+		BPHYT_RS31185	0.11	-0.6
2,554,687	+		BPHYT_RS31185	0.44	+0.0
2,554,809	-		BPHYT_RS31185	0.57	+0.5
2,554,809	-		BPHYT_RS31185	0.57	+0.8
2,554,809	-		BPHYT_RS31185	0.57	+0.6