Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31145

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
2,543,029	+		BPHYT_RS31140	0.69	-0.9
2,543,089	+		BPHYT_RS31140	0.73	-2.9
2,543,090	-		BPHYT_RS31140	0.73	-0.7
2,543,221	+		BPHYT_RS31140	0.83	+0.2
2,543,255	-		BPHYT_RS31140	0.86	+0.4
2,543,326	+				+0.1
2,543,327	-				-0.5
2,543,571	-				-0.9
2,543,621	-				+0.4
2,543,682	+				-0.7
2,543,703	-				-1.1
2,543,754	-				-2.1
2,543,904	-		BPHYT_RS31145	0.19	+0.6
2,543,953	-		BPHYT_RS31145	0.23	+0.7
2,544,047	+		BPHYT_RS31145	0.30	-0.8
2,544,250	+		BPHYT_RS31145	0.46	-1.4
2,544,455	+		BPHYT_RS31145	0.62	-0.7
2,544,494	+		BPHYT_RS31145	0.65	-0.4
2,544,494	+		BPHYT_RS31145	0.65	-0.1
2,544,503	+		BPHYT_RS31145	0.66	+0.5
2,544,782	+		BPHYT_RS31145	0.88	+1.0
2,544,783	-		BPHYT_RS31145	0.88	-1.1
2,544,783	-		BPHYT_RS31145	0.88	+0.2
2,544,783	-		BPHYT_RS31145	0.88	-1.9
2,545,083	+				-1.6
2,545,086	+				-1.2
2,545,087	-				-0.8
2,545,089	+				-2.0
2,545,215	+				+0.8
2,545,215	+				-1.0
2,545,298	+		BPHYT_RS31150	0.21	-1.2
2,545,504	-		BPHYT_RS31150	0.50	-2.0
2,545,922	+				-0.1
2,545,922	+				-2.0
2,545,922	+				-2.5
2,545,922	+				-0.9
2,545,923	-				-2.1