Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31130

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
2,539,699	-				-1.7
2,539,700	+				+0.5
2,539,700	+				-0.5
2,539,786	+		BPHYT_RS31125	0.10	-0.5
2,539,787	-		BPHYT_RS31125	0.11	+0.7
2,539,888	-		BPHYT_RS31125	0.33	-0.8
2,540,212	-				+0.5
2,540,328	+		BPHYT_RS31130	0.19	-0.0
2,540,433	-		BPHYT_RS31130	0.71	-1.0
2,540,433	-		BPHYT_RS31130	0.71	+1.0
2,540,434	+		BPHYT_RS31130	0.71	-2.5
2,540,492	+				+0.8
2,540,492	+				+0.4
2,540,560	-				+0.9
2,540,597	+				+0.3
2,541,066	-		BPHYT_RS31135	0.22	-1.3
2,541,157	+		BPHYT_RS31135	0.29	-0.2
2,541,158	-		BPHYT_RS31135	0.29	-0.7
2,541,296	-		BPHYT_RS31135	0.40	-1.1
2,541,312	+		BPHYT_RS31135	0.41	-0.7