Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27005

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
1,635,970	+		BPHYT_RS27000	0.47	+0.3
1,635,971	-		BPHYT_RS27000	0.47	-0.1
1,635,993	+		BPHYT_RS27000	0.49	+0.2
1,636,023	-		BPHYT_RS27000	0.52	-0.1
1,636,213	+		BPHYT_RS27000	0.68	+0.3
1,636,213	+		BPHYT_RS27000	0.68	-0.6
1,636,214	-		BPHYT_RS27000	0.68	+1.8
1,636,214	-		BPHYT_RS27000	0.68	+0.7
1,636,396	+		BPHYT_RS27000	0.84	+0.9
1,636,479	+				+0.4
1,636,480	-				-0.1
1,636,777	-				-0.3
1,636,992	+		BPHYT_RS27005	0.18	-0.2
1,636,993	-		BPHYT_RS27005	0.18	-1.0
1,637,248	-		BPHYT_RS27005	0.35	-0.1
1,637,343	+		BPHYT_RS27005	0.42	+0.7
1,637,343	+		BPHYT_RS27005	0.42	-1.4
1,637,344	-		BPHYT_RS27005	0.42	-1.4
1,637,344	-		BPHYT_RS27005	0.42	+0.7
1,638,191	+				+0.8
1,638,199	+				-0.1
1,638,199	+				-1.0
1,638,200	-				-1.4
1,638,212	-				+0.5
1,638,242	+				-1.0
1,638,246	+				-1.6
1,638,247	-				+0.3
1,638,357	+				-0.2
1,638,358	-				+0.3
1,639,060	+				+0.7