Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16520

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
3,744,085	+				-0.2
3,744,085	+				-0.9
3,744,086	-				-0.2
3,744,086	-				+0.2
3,744,086	-				+0.7
3,744,118	+				+1.3
3,744,296	+		BPHYT_RS16515	0.18	-1.1
3,744,515	-		BPHYT_RS16515	0.49	-2.4
3,744,815	+				-0.0
3,744,815	+				+0.2
3,744,815	+				-0.0
3,744,816	-				-1.1
3,744,816	-				-0.2
3,744,905	-				-0.2
3,744,918	+				+2.2
3,744,918	+				-0.6
3,744,918	+				-1.0
3,744,919	-				+0.2
3,744,919	-				-0.7
3,744,919	-				+0.1
3,744,919	-				-0.4
3,744,919	-				-1.7
3,744,919	-				+0.3
3,744,949	+				+0.4
3,744,963	+				-1.1
3,744,964	-				-0.3
3,745,054	-				+0.5
3,745,054	-				-0.0
3,745,054	-				-1.7
3,745,091	-				-1.5
3,745,235	-		BPHYT_RS16520	0.16	-2.3
3,745,281	-		BPHYT_RS16520	0.20	-1.9
3,745,553	+		BPHYT_RS16520	0.43	+0.3
3,745,554	-		BPHYT_RS16520	0.43	-0.1
3,745,554	-		BPHYT_RS16520	0.43	-1.3
3,745,554	-		BPHYT_RS16520	0.43	+0.4
3,745,557	+		BPHYT_RS16520	0.43	-1.9
3,745,557	+		BPHYT_RS16520	0.43	-1.2
3,745,557	+		BPHYT_RS16520	0.43	-0.8
3,745,557	+		BPHYT_RS16520	0.43	-0.3
3,745,558	-		BPHYT_RS16520	0.43	-1.6
3,745,558	-		BPHYT_RS16520	0.43	+0.1
3,745,558	-		BPHYT_RS16520	0.43	+1.2
3,745,558	-		BPHYT_RS16520	0.43	-1.1
3,745,947	+		BPHYT_RS16520	0.77	-0.4
3,745,973	-		BPHYT_RS16520	0.79	+0.3
3,745,973	-		BPHYT_RS16520	0.79	-0.4
3,745,973	-		BPHYT_RS16520	0.79	-0.0
3,746,237	-				+0.0