Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15080

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
3,429,851	+				-0.9
3,429,852	-				+1.0
3,429,858	+				-0.0
3,429,870	-				+0.2
3,429,894	+				-0.1
3,430,034	-		BPHYT_RS15075	0.18	+0.3
3,430,220	-		BPHYT_RS15075	0.54	+2.3
3,430,220	-		BPHYT_RS15075	0.54	+0.3
3,430,667	-				-2.0
3,430,670	+				-0.4
3,430,671	-				-0.3
3,430,671	-				-0.7
3,430,730	+				-0.3
3,430,730	+				-0.2
3,430,730	+				+0.6
3,430,731	-				-0.3
3,430,731	-				-0.1
3,430,731	-				-2.1
3,430,735	+				-0.1
3,430,736	+				+0.1
3,430,736	+				-0.7
3,430,737	-				-1.0
3,430,737	-				-0.9
3,430,760	+				+0.1
3,430,760	+				-0.9
3,431,070	+		BPHYT_RS15080	0.20	+0.3
3,431,600	+		BPHYT_RS15080	0.52	-0.3
3,431,601	-		BPHYT_RS15080	0.52	-0.7
3,431,601	-		BPHYT_RS15080	0.52	-0.7
3,431,601	-		BPHYT_RS15080	0.52	-0.9
3,431,687	+		BPHYT_RS15080	0.57	-0.1
3,431,688	-		BPHYT_RS15080	0.57	-0.8
3,431,688	-		BPHYT_RS15080	0.57	-1.7
3,432,203	+		BPHYT_RS15080	0.89	-0.9
3,432,502	+				+1.4
3,432,503	-				-1.1
3,432,621	-				-0.4
3,432,715	+		BPHYT_RS15085	0.14	+0.9
3,432,716	-		BPHYT_RS15085	0.14	-0.2
3,432,971	-		BPHYT_RS15085	0.25	-1.3
3,432,971	-		BPHYT_RS15085	0.25	-1.2
3,432,991	+		BPHYT_RS15085	0.25	+0.0
3,433,074	+		BPHYT_RS15085	0.29	+0.5
3,433,075	-		BPHYT_RS15085	0.29	-1.1
3,433,075	-		BPHYT_RS15085	0.29	-0.7
3,433,100	+		BPHYT_RS15085	0.30	+0.3
3,433,100	+		BPHYT_RS15085	0.30	-0.1
3,433,100	+		BPHYT_RS15085	0.30	-0.5
3,433,100	+		BPHYT_RS15085	0.30	-1.5
3,433,101	-		BPHYT_RS15085	0.30	+0.1
3,433,101	-		BPHYT_RS15085	0.30	-0.6
3,433,270	+		BPHYT_RS15085	0.37	+0.2
3,433,271	-		BPHYT_RS15085	0.37	+1.5
3,433,276	+		BPHYT_RS15085	0.37	-0.4
3,433,305	+		BPHYT_RS15085	0.38	-0.3