Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13480
Experiment: 24hr PHYTO10 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO10 MOI 1 |
---|---|---|---|---|---|
remove | |||||
3,076,249 | - | BPHYT_RS13475 | 0.52 | -0.0 | |
3,076,508 | + | BPHYT_RS13475 | 0.68 | -0.3 | |
3,077,094 | + | -1.0 | |||
3,077,136 | - | +3.0 | |||
3,077,183 | + | -1.2 | |||
3,077,929 | - | -0.9 | |||
3,077,937 | + | +0.7 | |||
3,077,964 | + | +0.6 | |||
3,077,964 | + | -0.8 | |||
3,078,241 | - | -0.0 | |||
3,078,654 | - | -0.0 | |||
3,078,676 | + | +0.7 |
Or see this region's nucleotide sequence