Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07040

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
1,591,203	+		BPHYT_RS07035	0.63	+0.0
1,591,284	+		BPHYT_RS07035	0.72	+0.3
1,591,285	-		BPHYT_RS07035	0.72	-1.6
1,591,285	-		BPHYT_RS07035	0.72	-1.8
1,591,432	-		BPHYT_RS07035	0.88	+0.4
1,591,582	-				-0.5
1,591,582	-				-0.5
1,591,621	-				+0.7
1,591,706	+				-0.4
1,591,706	+				+2.3
1,591,707	-				+1.3
1,591,997	-		BPHYT_RS07040	0.33	-1.7
1,592,342	-		BPHYT_RS07040	0.65	-1.0
1,592,360	-		BPHYT_RS07040	0.66	+0.8
1,592,558	-		BPHYT_RS07040	0.84	-1.8
1,592,820	+				+0.3
1,593,074	+				+2.3
1,593,075	-				-1.6
1,593,138	+		BPHYT_RS07045	0.15	-0.5
1,593,175	-		BPHYT_RS07045	0.19	-2.1
1,593,332	+		BPHYT_RS07045	0.35	+0.9
1,593,346	-		BPHYT_RS07045	0.36	-0.5
1,593,460	-		BPHYT_RS07045	0.48	-3.5
1,593,500	-		BPHYT_RS07045	0.52	+0.1
1,593,500	-		BPHYT_RS07045	0.52	-0.8
1,593,545	-		BPHYT_RS07045	0.57	-0.7