Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06590

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
1,494,965	+				-0.5
1,494,966	-				-0.9
1,495,002	+				+0.8
1,495,003	-				+0.1
1,495,047	-				-0.0
1,495,147	+				+3.2
1,495,151	+				-1.3
1,495,151	+				-2.6
1,495,151	+				-1.3
1,495,152	-				-0.6
1,495,152	-				-0.0
1,495,154	-				-0.8
1,495,154	-				-1.5
1,495,269	+		BPHYT_RS06585	0.16	+1.5
1,495,269	+		BPHYT_RS06585	0.16	-2.4
1,495,270	-		BPHYT_RS06585	0.17	-0.1
1,495,270	-		BPHYT_RS06585	0.17	-1.8
1,495,270	-		BPHYT_RS06585	0.17	-1.1
1,495,278	+		BPHYT_RS06585	0.18	-1.2
1,495,279	-		BPHYT_RS06585	0.18	+0.4
1,495,279	-		BPHYT_RS06585	0.18	-0.6
1,495,300	-		BPHYT_RS06585	0.22	+0.1
1,495,306	-		BPHYT_RS06585	0.23	-0.2
1,495,306	-		BPHYT_RS06585	0.23	-1.0
1,495,338	+		BPHYT_RS06585	0.29	+0.2
1,495,338	+		BPHYT_RS06585	0.29	+0.0
1,495,339	-		BPHYT_RS06585	0.29	+0.0
1,495,339	-		BPHYT_RS06585	0.29	-1.1
1,495,410	+		BPHYT_RS06585	0.42	+0.9
1,495,411	-		BPHYT_RS06585	0.42	-0.4
1,495,542	+		BPHYT_RS06585	0.66	-1.3
1,495,603	-		BPHYT_RS06585	0.77	+0.5
1,495,603	-		BPHYT_RS06585	0.77	-0.1
1,495,731	+				+0.1
1,495,731	+				-0.7
1,495,731	+				-0.4
1,495,732	-				+0.3
1,495,732	-				+1.1
1,495,732	-				+0.1
1,495,763	+				+1.2
1,495,779	+				-0.3
1,495,862	+				+0.3
1,495,862	+				-2.2
1,495,863	-				+0.2
1,495,881	+				+2.7
1,495,881	+				-0.2
1,495,881	+				-0.1
1,495,881	+				+0.3
1,495,882	-				-0.8
1,495,882	-				+0.7
1,495,882	-				+0.7
1,495,983	+				+0.6
1,496,100	-		BPHYT_RS06590	0.13	-0.2
1,496,361	+		BPHYT_RS06590	0.32	-0.7
1,496,463	+		BPHYT_RS06590	0.39	+0.6
1,496,463	+		BPHYT_RS06590	0.39	-2.0
1,496,463	+		BPHYT_RS06590	0.39	-1.1
1,496,464	-		BPHYT_RS06590	0.39	-0.6
1,496,596	-		BPHYT_RS06590	0.48	-1.0
1,496,596	-		BPHYT_RS06590	0.48	-0.4
1,496,596	-		BPHYT_RS06590	0.48	-1.2
1,496,596	-		BPHYT_RS06590	0.48	-0.9
1,496,596	-		BPHYT_RS06590	0.48	-0.2
1,496,596	-		BPHYT_RS06590	0.48	-0.0
1,496,613	+		BPHYT_RS06590	0.50	+0.8
1,496,613	+		BPHYT_RS06590	0.50	-0.6
1,496,614	-		BPHYT_RS06590	0.50	+0.7
1,496,614	-		BPHYT_RS06590	0.50	-0.4
1,496,614	-		BPHYT_RS06590	0.50	+0.2
1,496,733	+		BPHYT_RS06590	0.58	-1.2
1,496,848	-		BPHYT_RS06590	0.66	-1.9
1,496,848	-				+0.2
1,496,848	-		BPHYT_RS06590	0.66	-0.8
1,496,849	+		BPHYT_RS06590	0.66	-1.2
1,496,849	+		BPHYT_RS06590	0.66	-0.2
1,496,850	-		BPHYT_RS06590	0.67	-0.9
1,496,850	-		BPHYT_RS06590	0.67	+0.7
1,497,038	-		BPHYT_RS06590	0.80	-0.8
1,497,038	-		BPHYT_RS06590	0.80	+0.1
1,497,180	+				-0.2
1,497,181	-				+0.4
1,497,773	+				+1.3
1,497,773	+				+0.2
1,497,913	+				-0.6
1,497,933	+				-1.2
1,498,031	+				+0.5
1,498,056	+				+0.4
1,498,062	+				+0.1
1,498,122	+				-1.8