Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06525

Experiment: 24hr PHYTO10 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO10 MOI 1
1,481,792	+		BPHYT_RS06520	0.38	+0.2
1,481,978	+		BPHYT_RS06520	0.58	-1.1
1,481,978	+		BPHYT_RS06520	0.58	-0.5
1,481,979	-		BPHYT_RS06520	0.58	-0.5
1,482,083	-		BPHYT_RS06520	0.69	+0.3
1,482,098	+		BPHYT_RS06520	0.71	-0.0
1,482,099	-		BPHYT_RS06520	0.71	+0.0
1,482,099	-		BPHYT_RS06520	0.71	-1.1
1,482,105	-		BPHYT_RS06520	0.72	+0.4
1,482,141	-		BPHYT_RS06520	0.75	-1.8
1,482,401	-				-0.1
1,482,450	-				-0.7
1,482,452	+				-0.2
1,482,567	-				-0.6
1,482,932	-		BPHYT_RS06525	0.36	+1.0
1,482,932	-		BPHYT_RS06525	0.36	+0.7
1,482,932	-		BPHYT_RS06525	0.36	-2.3
1,483,045	+		BPHYT_RS06525	0.58	+0.1
1,483,045	+		BPHYT_RS06525	0.58	-0.2
1,483,045	+		BPHYT_RS06525	0.58	-1.3
1,483,045	+		BPHYT_RS06525	0.58	+1.5
1,483,133	-		BPHYT_RS06525	0.75	-0.4
1,483,174	+		BPHYT_RS06525	0.82	-0.4
1,483,175	-		BPHYT_RS06525	0.83	+1.3
1,483,210	-		BPHYT_RS06525	0.89	+0.0
1,483,575	-		BPHYT_RS06530	0.39	+3.2
1,483,629	-		BPHYT_RS06530	0.46	-0.1
1,483,967	+				-0.9
1,484,034	-				-0.8
1,484,077	-				+0.2
1,484,101	-		BPHYT_RS06535	0.10	-0.5
1,484,126	+		BPHYT_RS06535	0.16	-1.7
1,484,127	-		BPHYT_RS06535	0.16	-1.6
1,484,127	-		BPHYT_RS06535	0.16	+0.1
1,484,181	+		BPHYT_RS06535	0.29	-0.1
1,484,181	+		BPHYT_RS06535	0.29	+0.6