Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28665

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
1,983,552	+		BPHYT_RS28660	0.86	-2.2
1,983,618	-				-1.2
1,983,618	-				+0.0
1,983,766	-				-0.2
1,983,768	-				-0.2
1,983,928	+				-1.2
1,983,928	+				-1.3
1,983,989	-				+0.4
1,984,149	-				+0.6
1,984,152	+				-0.7
1,984,152	+				-0.2
1,984,156	+				-0.1
1,984,335	+				+0.3
1,984,467	+				+0.4
1,984,468	-				-0.5
1,985,225	-				-0.9
1,985,767	+		BPHYT_RS28670	0.24	+2.4
1,985,871	-		BPHYT_RS28670	0.32	+1.4
1,986,160	+		BPHYT_RS28670	0.53	-0.2
1,986,161	-		BPHYT_RS28670	0.53	+1.1
1,986,242	-		BPHYT_RS28670	0.59	+1.0