Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28485

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
1,944,465	-		BPHYT_RS28480	0.62	-2.1
1,944,598	-		BPHYT_RS28480	0.73	-1.3
1,945,065	-				-0.1
1,945,084	-				+0.3
1,945,401	-		BPHYT_RS28485	0.47	-0.9
1,945,805	+				-0.3
1,945,813	+				-1.7
1,945,865	-				-1.5
1,945,865	-				-1.3
1,946,230	-		BPHYT_RS28490	0.11	-0.4
1,946,273	+		BPHYT_RS28490	0.14	+1.4
1,946,273	+		BPHYT_RS28490	0.14	-0.8
1,946,273	+		BPHYT_RS28490	0.14	+0.7
1,946,432	+		BPHYT_RS28490	0.25	-1.3
1,946,652	-		BPHYT_RS28490	0.41	-0.5
1,946,685	+		BPHYT_RS28490	0.44	-0.9