Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27175

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
1,673,796	-		BPHYT_RS27170	0.79	+1.1
1,673,886	-		BPHYT_RS27170	0.86	+0.5
1,673,982	-				+0.7
1,673,982	-				-0.4
1,674,119	-				+1.0
1,674,360	-				+0.4
1,674,747	-		BPHYT_RS27175	0.47	+1.1
1,675,248	+				+1.1
1,675,291	+				+0.6
1,675,291	+				+1.4
1,675,305	+				+2.4
1,675,306	-				+1.0
1,675,306	-				+0.0
1,675,306	-				+0.5
1,675,306	-				+0.3
1,675,486	-		BPHYT_RS27180	0.15	-0.5
1,675,874	-		BPHYT_RS27180	0.70	-0.6
1,675,893	+		BPHYT_RS27180	0.73	-1.8
1,675,894	-		BPHYT_RS27180	0.73	-0.3
1,676,142	+				-0.1