Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26995

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
1,632,564	+				-0.5
1,632,642	+		BPHYT_RS26990	0.16	-0.2
1,632,881	-		BPHYT_RS26990	0.48	-2.4
1,632,918	+		BPHYT_RS26990	0.53	-1.8
1,633,379	-				-0.4
1,633,521	+				+2.4
1,633,614	+				+0.7
1,633,707	+		BPHYT_RS26995	0.14	+0.8
1,633,708	-		BPHYT_RS26995	0.14	+0.6
1,633,713	-		BPHYT_RS26995	0.15	-0.1
1,633,881	+		BPHYT_RS26995	0.24	-1.1
1,634,358	+		BPHYT_RS26995	0.51	+0.3
1,634,574	+		BPHYT_RS26995	0.63	+0.8
1,634,575	-		BPHYT_RS26995	0.63	+1.3
1,634,575	-		BPHYT_RS26995	0.63	+0.3
1,635,066	-				-2.4
1,635,066	-				-0.4
1,635,067	+				+0.7
1,635,446	+				+0.6
1,635,970	+		BPHYT_RS27000	0.47	-0.7
1,635,971	-		BPHYT_RS27000	0.47	-0.8
1,635,993	+		BPHYT_RS27000	0.49	-2.6
1,636,023	-		BPHYT_RS27000	0.52	-1.5
1,636,213	+		BPHYT_RS27000	0.68	-0.2
1,636,213	+		BPHYT_RS27000	0.68	-0.7
1,636,214	-		BPHYT_RS27000	0.68	+1.8
1,636,214	-		BPHYT_RS27000	0.68	+0.6