Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24765

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
1,120,018	+		BPHYT_RS24760	0.52	+0.2
1,120,091	-		BPHYT_RS24760	0.65	+0.2
1,120,276	+				+0.7
1,120,277	-				+0.6
1,120,318	-				-2.2
1,120,744	-		BPHYT_RS24765	0.18	-0.3
1,120,827	+		BPHYT_RS24765	0.22	-0.2
1,120,827	+		BPHYT_RS24765	0.22	-0.8
1,120,854	+		BPHYT_RS24765	0.23	-1.0
1,120,855	-		BPHYT_RS24765	0.23	-1.4
1,121,107	-		BPHYT_RS24765	0.33	+0.3
1,121,461	-		BPHYT_RS24765	0.47	+0.3
1,121,785	-		BPHYT_RS24765	0.60	-1.7
1,122,048	+		BPHYT_RS24765	0.71	+0.7
1,122,049	-		BPHYT_RS24765	0.71	+0.2
1,122,256	+		BPHYT_RS24765	0.79	+1.7
1,122,677	+				+0.3
1,122,677	+				-0.5
1,122,709	-				-1.8
1,122,907	+				-2.3
1,122,908	-				-1.0
1,122,939	-				-0.3
1,122,939	-				+1.0
1,123,024	-				+0.5
1,123,371	-		BPHYT_RS24770	0.40	+0.6
1,123,371	-		BPHYT_RS24770	0.40	+0.4
1,123,742	-		BPHYT_RS24770	0.88	+0.1