Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS22920
Experiment: 24hr PHYTO3 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO3 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 700,180 | + | BPHYT_RS22915 | 0.38 | +2.7 | |
| 700,353 | - | BPHYT_RS22915 | 0.53 | -1.4 | |
| 701,357 | + | BPHYT_RS22920 | 0.28 | -0.0 | |
| 701,357 | + | +1.3 | |||
| 701,358 | - | BPHYT_RS22920 | 0.28 | -0.6 | |
| 701,358 | - | BPHYT_RS22920 | 0.28 | +0.1 | |
| 701,358 | - | BPHYT_RS22920 | 0.28 | -1.1 | |
| 701,360 | - | BPHYT_RS22920 | 0.28 | -0.0 | |
| 702,251 | - | -0.8 | |||
| 702,688 | + | BPHYT_RS22925 | 0.31 | +1.3 | |
| 702,689 | - | BPHYT_RS22925 | 0.31 | +0.5 | |
| 702,689 | - | BPHYT_RS22925 | 0.31 | -0.8 | |
| 702,930 | - | BPHYT_RS22925 | 0.56 | -0.3 |
Or see this region's nucleotide sequence