Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS21010

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
271,024	-		BPHYT_RS21005	0.26	-0.2
271,150	+		BPHYT_RS21005	0.39	-0.2
271,177	-		BPHYT_RS21005	0.42	-0.2
271,201	-		BPHYT_RS21005	0.44	-0.6
271,205	+		BPHYT_RS21005	0.44	-2.4
271,672	-				-1.1
271,681	+				+1.4
271,681	+				+0.7
271,682	-				-0.3
271,682	-				-1.5
271,712	-				-0.9
271,712	-				-1.1
271,739	-				-1.0
271,907	+				-0.7
272,915	+		BPHYT_RS21010	0.88	+0.7
273,011	-				-1.1
273,011	-				-0.5
273,014	-				-0.7
273,054	+				+0.1
273,195	-				-1.4