Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18780

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
4,222,055	-				-0.0
4,222,263	+		BPHYT_RS18775	0.64	+0.4
4,222,263	+		BPHYT_RS18775	0.64	-0.1
4,222,263	+		BPHYT_RS18775	0.64	+0.3
4,222,264	-		BPHYT_RS18775	0.64	-1.1
4,222,344	+		BPHYT_RS18775	0.69	-0.3
4,222,344	+		BPHYT_RS18775	0.69	+0.2
4,222,344	+		BPHYT_RS18775	0.69	-0.6
4,222,344	+		BPHYT_RS18775	0.69	-0.8
4,222,345	-		BPHYT_RS18775	0.69	-0.6
4,222,345	-		BPHYT_RS18775	0.69	+0.3
4,222,345	-		BPHYT_RS18775	0.69	+1.8
4,222,812	+				-0.2
4,222,812	+				-0.9
4,222,813	-				-1.1
4,222,813	-				+0.1
4,223,120	-		BPHYT_RS18780	0.22	+0.5
4,223,120	-		BPHYT_RS18780	0.22	-0.4
4,223,200	-		BPHYT_RS18780	0.30	-0.5
4,223,554	+		BPHYT_RS18780	0.66	-0.7
4,223,581	-		BPHYT_RS18780	0.69	-0.5
4,223,884	+				-0.9
4,223,884	+				-1.0
4,223,884	+				-0.6
4,223,884	+				-0.7
4,223,884	+				-0.4
4,223,885	-				-0.0
4,223,885	-				-0.2
4,223,885	-				-0.8
4,223,885	-				+0.3
4,223,885	-				-0.7
4,223,885	-				-0.7
4,223,885	-				-0.6
4,223,885	-				-0.9
4,223,885	-				+0.2
4,223,885	-				-1.8
4,223,885	-				+0.4
4,224,398	+		BPHYT_RS18785	0.76	+0.4