Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16220

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
3,680,776	+		BPHYT_RS16215	0.24	-0.7
3,680,777	-		BPHYT_RS16215	0.24	-0.8
3,681,346	-		BPHYT_RS16215	0.68	-1.2
3,681,518	+		BPHYT_RS16215	0.81	-0.5
3,681,518	+		BPHYT_RS16215	0.81	-0.6
3,681,519	-		BPHYT_RS16215	0.81	-0.8
3,681,789	+				-0.4
3,681,789	+				+1.3
3,681,852	+		BPHYT_RS16220	0.13	+1.3
3,682,137	+		BPHYT_RS16220	0.56	+2.3
3,682,415	+				+0.3
3,682,467	+				-1.3
3,682,694	+				-0.5
3,682,694	+				+0.1
3,682,694	+				-0.6
3,682,694	+				-0.9
3,682,694	+				+0.7
3,682,695	-				+0.0
3,682,695	-				-1.0
3,682,695	-				-3.2
3,682,695	-				-0.1
3,682,695	-				-0.6
3,682,695	-				-0.9
3,682,695	-				+0.2
3,682,695	-				-0.1
3,682,695	-				+0.2
3,682,695	-				-0.6
3,682,695	-				-0.2
3,682,698	+				-0.8
3,682,698	+				-1.1
3,682,698	+				-0.0
3,682,698	+				-0.1
3,682,698	+				+0.9
3,682,698	+				-0.4
3,682,698	+				-0.0
3,682,698	+				-0.1
3,682,699	-				-1.1
3,682,699	-				-0.1
3,682,699	-				-0.8
3,682,699	-				-0.9
3,682,699	-				-1.2
3,682,699	-				-0.8
3,682,804	+				-0.7
3,683,007	+		BPHYT_RS16225	0.20	-0.5
3,683,123	+		BPHYT_RS16225	0.27	-2.1
3,683,223	-		BPHYT_RS16225	0.33	-0.4
3,683,223	-		BPHYT_RS16225	0.33	-0.3
3,683,223	-		BPHYT_RS16225	0.33	-2.1
3,683,223	-		BPHYT_RS16225	0.33	-1.2
3,683,340	-		BPHYT_RS16225	0.39	-0.4
3,683,340	-		BPHYT_RS16225	0.39	-0.6
3,683,423	+		BPHYT_RS16225	0.44	-0.6
3,683,423	+		BPHYT_RS16225	0.44	-0.7
3,683,423	+		BPHYT_RS16225	0.44	+0.2
3,683,423	+				-0.7
3,683,424	-		BPHYT_RS16225	0.44	-0.7