Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14280

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
3,262,113	-		BPHYT_RS14270	0.34	+1.9
3,262,122	-		BPHYT_RS14270	0.35	+1.0
3,262,265	+		BPHYT_RS14270	0.59	+0.8
3,262,265	+		BPHYT_RS14270	0.59	+0.2
3,262,265	+		BPHYT_RS14270	0.59	-0.2
3,262,266	-		BPHYT_RS14270	0.59	+0.1
3,262,266	-		BPHYT_RS14270	0.59	-0.8
3,262,388	+		BPHYT_RS14270	0.79	-1.1
3,262,389	-		BPHYT_RS14270	0.79	+0.8
3,262,402	+		BPHYT_RS14270	0.81	+1.0
3,262,402	+		BPHYT_RS14270	0.81	-0.3
3,262,402	+		BPHYT_RS14270	0.81	+0.3
3,262,415	+		BPHYT_RS14270	0.83	-0.6
3,262,416	-		BPHYT_RS14270	0.83	+0.8
3,262,755	-		BPHYT_RS14275	0.47	-0.3
3,262,997	+				+1.5
3,262,998	-				-0.3
3,263,029	+				+1.0
3,263,171	-		BPHYT_RS14280	0.18	+0.7
3,263,171	-		BPHYT_RS14280	0.18	-0.3
3,263,171	-		BPHYT_RS14280	0.18	+0.1
3,263,171	-		BPHYT_RS14280	0.18	+0.7
3,263,198	-		BPHYT_RS14280	0.21	+2.6
3,263,316	+		BPHYT_RS14280	0.34	-0.4
3,263,317	-		BPHYT_RS14280	0.34	+1.0
3,263,428	+		BPHYT_RS14280	0.47	+0.7
3,263,672	-		BPHYT_RS14280	0.75	-0.1
3,263,829	+				-0.6
3,263,890	+				+0.6
3,264,248	+		BPHYT_RS14285	0.61	+0.3
3,264,249	-		BPHYT_RS14285	0.61	-0.3
3,264,297	-		BPHYT_RS14285	0.71	-1.7
3,264,348	+		BPHYT_RS14285	0.81	-0.5
3,264,348	+		BPHYT_RS14285	0.81	-0.3
3,264,348	+		BPHYT_RS14285	0.81	+0.2
3,264,348	+		BPHYT_RS14285	0.81	+0.6
3,264,348	+		BPHYT_RS14285	0.81	+1.0
3,264,349	-		BPHYT_RS14285	0.81	+1.5
3,264,349	-		BPHYT_RS14285	0.81	-0.3
3,264,349	-		BPHYT_RS14285	0.81	+1.1
3,264,349	-		BPHYT_RS14285	0.81	+0.4
3,264,349	-		BPHYT_RS14285	0.81	-0.6
3,264,350	+		BPHYT_RS14285	0.81	+0.3
3,264,350	+		BPHYT_RS14285	0.81	+0.7
3,264,351	-		BPHYT_RS14285	0.82	+0.5
3,264,452	+				+0.2
3,264,494	+				-0.1
3,264,576	+				-0.7
3,264,576	+				-0.6
3,264,577	-				+0.6
3,264,577	-				+0.9
3,264,636	+		BPHYT_RS14290	0.11	-0.4
3,264,637	-		BPHYT_RS14290	0.11	-0.7
3,264,637	-		BPHYT_RS14290	0.11	-0.2
3,264,669	+		BPHYT_RS14290	0.14	+0.3