Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13185

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
3,007,550	-		BPHYT_RS13180	0.27	-0.7
3,007,567	+		BPHYT_RS13180	0.29	+0.3
3,007,567	+		BPHYT_RS13180	0.29	-0.4
3,007,567	+		BPHYT_RS13180	0.29	-1.0
3,007,724	+		BPHYT_RS13180	0.49	+0.2
3,007,904	+		BPHYT_RS13180	0.72	+0.3
3,007,928	+		BPHYT_RS13180	0.75	+0.0
3,007,930	+		BPHYT_RS13180	0.75	+0.8
3,007,931	-		BPHYT_RS13180	0.75	+1.0
3,007,931	-		BPHYT_RS13180	0.75	-0.2
3,008,143	-				-0.6
3,008,143	-				-0.6
3,008,225	-				+0.7
3,008,450	+				+1.2
3,008,455	-				+1.5
3,008,455	-				-1.9
3,008,476	-				-0.7
3,009,109	-		BPHYT_RS13185	0.31	-0.8
3,009,217	+		BPHYT_RS13185	0.37	-0.6
3,009,933	+		BPHYT_RS13185	0.71	-1.6
3,009,933	+		BPHYT_RS13185	0.71	-1.7
3,010,718	+		BPHYT_RS13190	0.16	-0.3
3,010,718	+		BPHYT_RS13190	0.16	-0.5
3,010,808	+		BPHYT_RS13190	0.25	+1.6
3,011,308	+		BPHYT_RS13190	0.79	+0.7
3,011,384	+		BPHYT_RS13190	0.87	-0.0