Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11510

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
2,616,277	-		BPHYT_RS11505	0.23	+0.9
2,616,636	-		BPHYT_RS11505	0.55	-1.3
2,616,636	-		BPHYT_RS11505	0.55	+2.3
2,616,640	+		BPHYT_RS11505	0.56	-1.1
2,616,640	+		BPHYT_RS11505	0.56	+0.7
2,616,640	+		BPHYT_RS11505	0.56	-0.7
2,616,641	-		BPHYT_RS11505	0.56	-0.1
2,616,659	+		BPHYT_RS11505	0.58	-0.2
2,616,660	-		BPHYT_RS11505	0.58	-0.4
2,617,145	-				+1.2
2,617,376	-		BPHYT_RS11510	0.11	+0.9
2,617,529	+		BPHYT_RS11510	0.20	-0.3
2,617,530	-		BPHYT_RS11510	0.20	-0.1
2,618,027	+		BPHYT_RS11510	0.51	+0.1
2,618,790	-				+0.7
2,618,790	-				+0.4
2,618,790	-				-0.3
2,618,816	-				+0.1
2,618,816	-				+1.3
2,618,837	+				-0.1
2,618,895	-				+2.3
2,619,083	-				-0.1
2,619,086	+				-1.0
2,619,087	-				+0.3
2,619,254	+		BPHYT_RS11515	0.21	+2.5
2,619,255	-		BPHYT_RS11515	0.21	-0.1
2,619,664	+		BPHYT_RS11515	0.65	+0.7
2,619,664	+		BPHYT_RS11515	0.65	+0.0
2,619,770	+		BPHYT_RS11515	0.77	+0.7
2,619,771	-		BPHYT_RS11515	0.77	-0.1