Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09080

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
2,053,930	+		BPHYT_RS09075	0.40	-1.2
2,053,931	-		BPHYT_RS09075	0.41	-0.5
2,053,931	-		BPHYT_RS09075	0.41	-0.0
2,054,081	+		BPHYT_RS09075	0.53	+0.8
2,054,124	-		BPHYT_RS09075	0.56	+0.4
2,054,132	+		BPHYT_RS09075	0.57	+0.6
2,054,132	+		BPHYT_RS09075	0.57	-0.1
2,054,133	-		BPHYT_RS09075	0.57	-0.1
2,054,133	-		BPHYT_RS09075	0.57	+0.9
2,054,186	-		BPHYT_RS09075	0.61	-2.2
2,054,188	+		BPHYT_RS09075	0.61	-0.2
2,054,188	+		BPHYT_RS09075	0.61	-0.6
2,054,189	-		BPHYT_RS09075	0.61	-0.4
2,054,192	+		BPHYT_RS09075	0.62	-0.9
2,054,231	-		BPHYT_RS09075	0.65	-1.2
2,054,426	-		BPHYT_RS09075	0.80	-2.0
2,054,429	+		BPHYT_RS09075	0.81	+0.8
2,054,429	+		BPHYT_RS09075	0.81	-0.3
2,054,429	+		BPHYT_RS09075	0.81	-0.9
2,054,430	-		BPHYT_RS09075	0.81	-0.2
2,054,594	-				-0.2
2,054,829	-				-0.7
2,054,829	-				-0.3
2,054,987	-		BPHYT_RS09080	0.13	-1.6
2,054,987	-		BPHYT_RS09080	0.13	-0.0
2,054,987	-		BPHYT_RS09080	0.13	+1.8
2,055,023	-		BPHYT_RS09080	0.17	-1.0
2,055,023	-		BPHYT_RS09080	0.17	-2.1
2,055,135	+		BPHYT_RS09080	0.27	-1.0
2,055,238	+		BPHYT_RS09080	0.37	-1.1
2,055,238	+		BPHYT_RS09080	0.37	-0.9
2,055,239	-		BPHYT_RS09080	0.37	+0.2
2,055,493	-		BPHYT_RS09080	0.62	-0.5
2,055,529	-		BPHYT_RS09080	0.65	-1.3
2,055,547	+		BPHYT_RS09080	0.67	-1.5
2,055,548	-		BPHYT_RS09080	0.67	+0.4
2,055,548	-		BPHYT_RS09080	0.67	-0.4
2,055,676	+		BPHYT_RS09080	0.79	-0.0
2,055,700	+		BPHYT_RS09080	0.82	-1.3
2,055,700	+		BPHYT_RS09080	0.82	+0.5
2,056,163	-		BPHYT_RS09085	0.18	+0.6
2,056,224	+		BPHYT_RS09085	0.26	-0.2
2,056,268	-		BPHYT_RS09085	0.31	+0.8
2,056,268	-		BPHYT_RS09085	0.31	-0.7
2,056,268	-		BPHYT_RS09085	0.31	-1.0
2,056,800	-				+0.0
2,056,829	+				+0.0
2,056,865	-				+1.6