Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07045

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
1,591,997	-		BPHYT_RS07040	0.33	-1.3
1,592,342	-		BPHYT_RS07040	0.65	-0.3
1,592,360	-		BPHYT_RS07040	0.66	+0.7
1,592,558	-		BPHYT_RS07040	0.84	+0.5
1,592,820	+				+2.9
1,593,074	+				+1.3
1,593,075	-				-0.0
1,593,138	+		BPHYT_RS07045	0.15	-0.5
1,593,175	-		BPHYT_RS07045	0.19	-1.5
1,593,332	+		BPHYT_RS07045	0.35	+1.0
1,593,346	-		BPHYT_RS07045	0.36	+1.1
1,593,460	-		BPHYT_RS07045	0.48	-3.5
1,593,500	-		BPHYT_RS07045	0.52	+0.4
1,593,500	-		BPHYT_RS07045	0.52	-1.5
1,593,545	-		BPHYT_RS07045	0.57	-0.7
1,594,309	+				-1.0
1,594,309	+				-0.0
1,594,382	+				+0.6
1,594,383	-				+2.3
1,594,383	-				+0.2
1,594,383	-				-0.5
1,594,761	+		BPHYT_RS07050	0.67	-0.0
1,594,762	-		BPHYT_RS07050	0.68	-1.6
1,594,890	+				-0.6
1,594,891	-				-0.0
1,594,919	+				-0.4