Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06120

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
1,393,675	-		BPHYT_RS06115	0.84	-1.4
1,393,917	+		BPHYT_RS06115	0.90	+0.3
1,394,382	+				-1.7
1,394,382	+				-2.5
1,394,382	+				-0.3
1,394,382	+				-1.3
1,394,383	-				-0.2
1,394,383	-				-0.6
1,394,383	-				-0.7
1,394,386	-				-1.1
1,394,470	+				-2.1
1,394,470	+				-2.4
1,394,470	+				-1.3
1,394,470	+				-0.5
1,394,470	+				+0.3
1,394,471	-				+1.1
1,394,471	-				-0.1
1,394,471	-				-0.4
1,394,471	-				-1.4
1,394,471	-				-1.6
1,394,471	-				+1.0
1,394,471	-				-0.0
1,394,471	-				+1.5
1,394,762	-		BPHYT_RS06120	0.21	-1.5
1,394,864	-		BPHYT_RS06120	0.39	-0.7
1,394,864	-		BPHYT_RS06120	0.39	+2.3
1,395,243	+				+0.2
1,395,243	+				-0.9
1,395,244	-				-0.1
1,395,856	+		BPHYT_RS06125	0.33	+0.3
1,395,856	+		BPHYT_RS06125	0.33	+0.3
1,395,857	-		BPHYT_RS06125	0.33	-0.1
1,396,126	+		BPHYT_RS06125	0.56	-0.0
1,396,127	-		BPHYT_RS06125	0.56	+2.3
1,396,127	-		BPHYT_RS06125	0.56	-0.8
1,396,169	-		BPHYT_RS06125	0.59	-0.8