Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04500

Experiment: 24hr PHYTO3 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO3 MOI 1
1,039,348	+		BPHYT_RS04490	0.54	-1.6
1,039,509	+		BPHYT_RS04490	0.76	+0.0
1,039,891	+		BPHYT_RS04495	0.32	+0.5
1,039,930	-		BPHYT_RS04495	0.38	-0.0
1,039,930	-		BPHYT_RS04495	0.38	+0.4
1,040,166	+		BPHYT_RS04495	0.74	-0.0
1,040,166	+		BPHYT_RS04495	0.74	-0.5
1,040,166	+		BPHYT_RS04495	0.74	-0.6
1,040,167	-		BPHYT_RS04495	0.74	+0.8
1,040,196	+		BPHYT_RS04495	0.79	+0.8
1,040,197	-		BPHYT_RS04495	0.79	+0.2
1,040,197	-		BPHYT_RS04495	0.79	+0.0
1,040,348	+				-0.1
1,040,369	+				+1.1
1,040,609	+		BPHYT_RS04500	0.38	-0.4
1,040,958	-		BPHYT_RS04500	0.90	-0.3
1,041,411	+		BPHYT_RS04505	0.58	+0.4
1,041,512	+		BPHYT_RS04505	0.73	+0.5
1,041,512	+		BPHYT_RS04505	0.73	+0.0
1,041,513	-		BPHYT_RS04505	0.73	+0.7
1,041,513	-		BPHYT_RS04505	0.73	-1.0
1,041,713	+				+2.2
1,041,850	-				-1.3