Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34980

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,446,118	-				-0.5
3,446,118	-				-0.7
3,446,118	-				-0.3
3,446,118	-				-1.0
3,446,199	+		BPHYT_RS34975	0.20	-0.2
3,446,493	-		BPHYT_RS34975	0.55	-0.2
3,446,493	-		BPHYT_RS34975	0.55	-0.6
3,446,865	-				+0.9
3,447,368	+		BPHYT_RS34980	0.31	-0.3
3,447,368	+		BPHYT_RS34980	0.31	+0.7
3,447,745	-		BPHYT_RS34980	0.56	+2.8
3,448,021	-		BPHYT_RS34980	0.75	+0.0
3,448,031	+		BPHYT_RS34980	0.75	-0.1
3,448,189	-		BPHYT_RS34980	0.86	-1.2
3,448,335	+				-1.5
3,448,395	+				-0.4
3,448,854	-		BPHYT_RS34985	0.45	-2.6
3,449,113	+		BPHYT_RS34985	0.71	+0.1
3,449,113	+		BPHYT_RS34985	0.71	-0.8