Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34970

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,443,536	+				-0.9
3,444,315	+				-0.9
3,444,324	-				-0.5
3,444,339	+				-1.3
3,444,727	+		BPHYT_RS34970	0.21	+1.6
3,445,175	-		BPHYT_RS34970	0.48	+0.5
3,445,175	-		BPHYT_RS34970	0.48	-0.9
3,445,238	-		BPHYT_RS34970	0.51	+0.4
3,445,775	-		BPHYT_RS34970	0.84	+1.9
3,446,118	-				-0.5
3,446,118	-				-0.7
3,446,118	-				-0.3
3,446,118	-				-1.0
3,446,199	+		BPHYT_RS34975	0.20	-0.2
3,446,493	-		BPHYT_RS34975	0.55	-0.2
3,446,493	-		BPHYT_RS34975	0.55	-0.6
3,446,865	-				+0.9