Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34595

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,368,381	+		BPHYT_RS34590	0.58	-2.7
3,368,494	+		BPHYT_RS34590	0.66	+0.7
3,368,586	-		BPHYT_RS34590	0.73	-1.7
3,368,668	+		BPHYT_RS34590	0.79	-0.7
3,368,918	-				+0.1
3,369,354	+		BPHYT_RS34595	0.11	+0.3
3,369,354	+		BPHYT_RS34595	0.11	+0.2
3,369,456	+		BPHYT_RS34595	0.14	+0.1
3,369,507	+		BPHYT_RS34595	0.16	-1.4
3,369,507	+		BPHYT_RS34595	0.16	+0.2
3,369,507	+		BPHYT_RS34595	0.16	+0.0
3,369,508	-		BPHYT_RS34595	0.16	-0.0
3,369,541	-		BPHYT_RS34595	0.17	+1.1
3,369,800	-		BPHYT_RS34595	0.25	-0.0
3,369,800	-		BPHYT_RS34595	0.25	+0.2
3,369,800	-		BPHYT_RS34595	0.25	-1.1
3,369,803	-		BPHYT_RS34595	0.25	+0.5
3,369,834	+		BPHYT_RS34595	0.26	-0.5
3,369,835	-		BPHYT_RS34595	0.26	-0.0
3,369,835	-		BPHYT_RS34595	0.26	-0.8
3,369,888	+		BPHYT_RS34595	0.28	-0.5
3,369,888	+		BPHYT_RS34595	0.28	-1.0
3,369,931	-		BPHYT_RS34595	0.29	-0.0
3,370,402	-		BPHYT_RS34595	0.44	-0.0
3,370,560	+		BPHYT_RS34595	0.49	+0.4
3,370,573	-		BPHYT_RS34595	0.49	-0.8
3,370,573	-		BPHYT_RS34595	0.49	-0.6
3,371,122	-		BPHYT_RS34595	0.67	-1.9
3,371,122	-		BPHYT_RS34595	0.67	+0.4
3,371,122	-		BPHYT_RS34595	0.67	+0.5
3,371,144	+		BPHYT_RS34595	0.67	-0.5
3,371,663	-		BPHYT_RS34595	0.84	+0.6
3,371,958	+				+0.2
3,371,958	+				-0.6
3,371,959	-				-0.1
3,372,205	+				+1.2
3,372,783	+		BPHYT_RS34600	0.47	-0.6
3,372,783	+		BPHYT_RS34600	0.47	-0.7
3,373,140	+		BPHYT_RS34600	0.75	+0.9