Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34165

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,267,747	+				+1.2
3,267,747	+				+0.6
3,267,748	-				-0.2
3,267,800	+				+1.1
3,267,800	+				-1.1
3,267,801	-				+0.3
3,267,801	-				-0.5
3,267,801	-				-0.5
3,267,924	-				-1.6
3,267,924	-				-0.5
3,267,924	-				+0.5
3,268,037	+				+0.0
3,268,038	-				-1.0
3,268,038	-				-0.5
3,268,103	+				+2.0
3,268,103	+				-0.1
3,268,104	-				-1.5
3,268,104	-				+0.0
3,268,131	+				+0.1
3,268,132	-				+0.2
3,268,132	-				+0.3
3,268,132	-				-0.3
3,268,132	-				+0.3
3,268,178	+				+0.3
3,268,184	+				+1.1
3,268,184	+				-0.6
3,268,185	-				-0.3
3,268,185	-				+0.4
3,268,338	+				-2.6
3,268,390	+				+0.5
3,268,577	+				+2.4
3,268,710	+				-0.3
3,268,711	-				-0.5
3,268,711	-				+0.4
3,268,714	+				-1.4
3,268,714	+				-0.2
3,268,715	-				-0.9
3,268,715	-				-2.4
3,268,715	-				-0.0
3,269,063	+		BPHYT_RS34165	0.27	-0.0
3,269,302	-		BPHYT_RS34165	0.44	+1.5
3,269,545	-		BPHYT_RS34165	0.61	-0.8
3,269,559	+		BPHYT_RS34165	0.62	-0.1
3,269,560	-		BPHYT_RS34165	0.62	+0.1
3,269,854	-		BPHYT_RS34165	0.83	-0.6
3,269,871	+		BPHYT_RS34165	0.85	-0.6
3,269,871	+		BPHYT_RS34165	0.85	-0.4
3,270,292	+		BPHYT_RS34170	0.11	+0.2
3,270,293	-		BPHYT_RS34170	0.11	-0.3
3,270,293	-		BPHYT_RS34170	0.11	-0.9
3,270,293	-		BPHYT_RS34170	0.11	+0.6
3,270,553	+		BPHYT_RS34170	0.49	+0.4
3,270,748	+		BPHYT_RS34170	0.77	+0.7
3,270,794	+		BPHYT_RS34170	0.84	+0.9
3,270,794	+		BPHYT_RS34170	0.84	-1.1
3,270,794	+		BPHYT_RS34170	0.84	+0.4
3,270,794	+		BPHYT_RS34170	0.84	+0.7
3,270,795	-		BPHYT_RS34170	0.84	+0.1
3,270,795	-		BPHYT_RS34170	0.84	+0.7
3,270,795	-		BPHYT_RS34170	0.84	-0.0
3,270,795	-		BPHYT_RS34170	0.84	+0.9
3,270,984	+				+0.7
3,270,985	-				-0.0
3,270,985	-				+0.0
3,270,985	-				-0.5
3,270,989	+				-1.8
3,270,990	-				+2.0
3,270,990	-				+0.2