Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34105

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,248,794	-		BPHYT_RS34100	0.38	+0.6
3,249,379	-				-0.1
3,249,379	-				-0.5
3,249,407	+				+0.1
3,249,423	+				-2.3
3,249,545	+				-0.8
3,249,545	+				+0.2
3,249,546	-				-2.0
3,249,547	+				-1.2
3,249,547	+				-0.2
3,249,563	+				-0.5
3,249,821	+		BPHYT_RS34105	0.14	-0.2
3,249,822	-		BPHYT_RS34105	0.14	-0.5
3,249,852	-		BPHYT_RS34105	0.16	-0.6
3,250,515	-		BPHYT_RS34105	0.59	+1.5
3,250,554	-		BPHYT_RS34105	0.61	+0.4
3,250,677	-		BPHYT_RS34105	0.69	-0.1
3,250,677	-		BPHYT_RS34105	0.69	+0.7
3,250,827	-		BPHYT_RS34105	0.79	-1.7
3,251,010	-				-0.2
3,251,233	+				+0.0
3,251,425	-				-1.3
3,251,425	-				-0.2
3,251,425	-				-1.0
3,251,425	-				-1.0
3,251,439	+				-0.5
3,251,439	+				-1.1
3,251,439	+				-0.9
3,251,439	+				-0.6
3,251,440	-				-0.0
3,251,440	-				-0.4
3,251,440	-				-1.4
3,251,448	+				-0.7
3,251,700	+		BPHYT_RS34110	0.15	-1.7
3,252,004	-		BPHYT_RS34110	0.23	-1.1
3,252,004	-		BPHYT_RS34110	0.23	-1.3
3,252,051	+		BPHYT_RS34110	0.24	-0.0
3,252,063	+		BPHYT_RS34110	0.24	+0.0
3,252,063	+		BPHYT_RS34110	0.24	+0.7