Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34025

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,232,249	+				+0.5
3,232,249	+				-0.4
3,232,484	+		BPHYT_RS34020	0.28	-2.2
3,232,485	-		BPHYT_RS34020	0.28	+0.9
3,232,507	-		BPHYT_RS34020	0.31	-0.2
3,232,507	-		BPHYT_RS34020	0.31	-0.6
3,232,721	-		BPHYT_RS34020	0.55	-1.8
3,232,721	-		BPHYT_RS34020	0.55	-0.7
3,232,934	-		BPHYT_RS34020	0.79	+0.6
3,233,025	-		BPHYT_RS34020	0.89	-0.7
3,233,091	+				+0.0
3,233,702	-		BPHYT_RS34025	0.81	+0.8
3,233,982	-				-0.2
3,234,116	+				+0.3
3,234,137	+				-0.8
3,234,567	-		BPHYT_RS34030	0.45	-1.5
3,234,569	-		BPHYT_RS34030	0.45	-0.8
3,234,740	-		BPHYT_RS34030	0.61	-0.4