Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33445

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,089,630	-		BPHYT_RS33440	0.12	-2.4
3,089,630	-		BPHYT_RS33440	0.12	+1.0
3,089,708	+		BPHYT_RS33440	0.20	+0.4
3,089,708	+		BPHYT_RS33440	0.20	+0.3
3,089,708	+		BPHYT_RS33440	0.20	+0.2
3,089,709	-		BPHYT_RS33440	0.20	-1.0
3,089,709	-		BPHYT_RS33440	0.20	-0.9
3,090,303	-		BPHYT_RS33440	0.86	-0.2
3,090,305	+		BPHYT_RS33440	0.86	-0.5
3,090,305	+		BPHYT_RS33440	0.86	-2.4
3,090,306	-		BPHYT_RS33440	0.86	-0.7
3,090,306	-		BPHYT_RS33440	0.86	-0.6
3,090,306	-		BPHYT_RS33440	0.86	-1.0
3,090,824	+		BPHYT_RS33445	0.32	-0.7
3,090,825	-		BPHYT_RS33445	0.32	-0.9
3,090,825	-		BPHYT_RS33445	0.32	-0.6
3,090,825	-				-0.1
3,091,172	+		BPHYT_RS33445	0.63	+0.5
3,091,172	+		BPHYT_RS33445	0.63	-0.2
3,091,172	+		BPHYT_RS33445	0.63	+1.3
3,091,173	-		BPHYT_RS33445	0.63	-0.5
3,091,173	-		BPHYT_RS33445	0.63	-0.2
3,091,176	+		BPHYT_RS33445	0.63	-1.4
3,091,176	+		BPHYT_RS33445	0.63	-1.8
3,091,176	+		BPHYT_RS33445	0.63	-0.4
3,091,177	-		BPHYT_RS33445	0.63	+0.5
3,091,177	-		BPHYT_RS33445	0.63	+0.6
3,091,177	-		BPHYT_RS33445	0.63	-0.2
3,091,378	-		BPHYT_RS33445	0.81	-1.1
3,091,425	+		BPHYT_RS33445	0.85	-1.1
3,091,606	+				-1.9
3,091,736	-				-2.1
3,091,736	-				-0.9
3,091,736	-				-0.2
3,091,815	-				+0.1
3,091,852	-				-2.3
3,091,888	-				+0.1
3,092,029	+		BPHYT_RS33450	0.19	-0.9
3,092,131	+		BPHYT_RS33450	0.29	-1.0