Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33330

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,059,237	+				+0.8
3,059,400	-				-1.4
3,059,639	-				+0.3
3,059,639	-				-2.6
3,059,639	-				-1.0
3,060,014	-				-0.3
3,060,065	-				+0.2
3,060,074	-				-1.4
3,060,313	-		BPHYT_RS33330	0.20	-2.1
3,060,385	+		BPHYT_RS33330	0.26	-0.9
3,060,937	+		BPHYT_RS33330	0.68	-1.1
3,060,983	+		BPHYT_RS33330	0.71	-0.1
3,060,984	-		BPHYT_RS33330	0.71	-1.3
3,061,191	+		BPHYT_RS33330	0.87	-1.3
3,061,555	+		BPHYT_RS33335	0.14	-0.5
3,061,630	-		BPHYT_RS33335	0.19	-2.3
3,062,096	+		BPHYT_RS33335	0.51	+0.9