Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32965

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
2,973,914	-		BPHYT_RS32955	0.76	-0.5
2,973,914	-		BPHYT_RS32955	0.76	-0.8
2,974,029	-				+0.3
2,974,053	-				+0.0
2,974,073	+				-1.6
2,974,074	-				-0.9
2,974,320	-		BPHYT_RS32960	0.32	+1.7
2,974,320	-		BPHYT_RS32960	0.32	+0.4
2,974,833	+				+0.5
2,974,834	-				-0.9
2,974,852	-				+0.5
2,974,852	-				+0.3
2,974,861	-				-0.5
2,974,886	-				-0.3
2,975,342	+				-0.4
2,975,364	-				+0.0
2,975,364	-				+0.2
2,975,364	-				+2.3
2,975,803	+		BPHYT_RS32970	0.36	+0.2
2,975,814	+		BPHYT_RS32970	0.38	+0.2
2,976,086	+		BPHYT_RS32970	0.81	+0.2