Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31965

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
2,730,222	+		BPHYT_RS31960	0.10	-0.3
2,730,667	+		BPHYT_RS31960	0.57	+1.4
2,730,758	+		BPHYT_RS31960	0.67	+0.6
2,730,759	-		BPHYT_RS31960	0.67	-1.6
2,731,081	+				+0.6
2,731,120	+				+0.4
2,731,145	+				+0.2
2,731,145	+				+0.0
2,731,277	-				-1.1
2,731,494	-		BPHYT_RS31965	0.29	-1.5
2,731,657	-		BPHYT_RS31965	0.43	+0.7
2,731,760	+		BPHYT_RS31965	0.52	-1.0
2,731,764	-		BPHYT_RS31965	0.52	-1.4
2,731,764	-		BPHYT_RS31965	0.52	+0.1
2,731,771	-		BPHYT_RS31965	0.53	-0.3
2,731,777	+		BPHYT_RS31965	0.54	-1.0
2,731,796	-		BPHYT_RS31965	0.55	-0.2
2,731,945	+		BPHYT_RS31965	0.68	+0.1
2,732,038	+		BPHYT_RS31965	0.77	-0.5
2,732,075	+		BPHYT_RS31965	0.80	-0.2
2,732,075	+		BPHYT_RS31965	0.80	-0.9
2,732,104	+		BPHYT_RS31965	0.82	-1.0
2,732,195	+				-0.9
2,732,434	-		BPHYT_RS31970	0.15	+0.4
2,732,537	+		BPHYT_RS31970	0.42	+1.0
2,732,640	+		BPHYT_RS31970	0.70	-0.1
2,732,679	-		BPHYT_RS31970	0.81	-0.7
2,732,775	+				+0.4
2,732,783	-				-0.7
2,732,851	+				-2.3
2,732,883	+				+0.1
2,732,996	-				-0.8
2,732,996	-				-0.7