Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31745

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
2,677,670	+				+1.1
2,677,750	+		BPHYT_RS31740	0.13	-1.5
2,677,750	+		BPHYT_RS31740	0.13	+0.8
2,677,751	-		BPHYT_RS31740	0.13	-1.4
2,678,238	-		BPHYT_RS31740	0.64	-0.4
2,678,322	+		BPHYT_RS31740	0.73	+0.2
2,678,323	-		BPHYT_RS31740	0.73	-2.0
2,678,596	+				-0.3
2,678,596	+				+0.5
2,678,729	+		BPHYT_RS31745	0.12	-1.0
2,678,838	-		BPHYT_RS31745	0.21	-0.7
2,679,016	-		BPHYT_RS31745	0.36	-2.1
2,679,067	+		BPHYT_RS31745	0.41	-0.6
2,679,213	-		BPHYT_RS31745	0.53	+0.3
2,679,213	-		BPHYT_RS31745	0.53	+0.7
2,679,219	-		BPHYT_RS31745	0.54	+0.5
2,679,884	+		BPHYT_RS31750	0.14	+1.0
2,679,884	+		BPHYT_RS31750	0.14	+0.6
2,679,991	+		BPHYT_RS31750	0.27	-0.4
2,680,009	+		BPHYT_RS31750	0.30	+0.6
2,680,232	-		BPHYT_RS31750	0.58	-0.6
2,680,250	+		BPHYT_RS31750	0.61	-0.4
2,680,594	+				+1.2
2,680,755	+		BPHYT_RS31755	0.28	+1.2