Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28640

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
1,978,388	-		BPHYT_RS28630	0.72	-0.6
1,978,417	+		BPHYT_RS28630	0.76	-0.4
1,978,589	+				+0.1
1,978,699	+				-0.9
1,978,852	-		BPHYT_RS28635	0.69	+0.9
1,978,852	-		BPHYT_RS28635	0.69	+0.6
1,979,035	+				+0.3
1,979,335	-				+1.8
1,979,776	-		BPHYT_RS28640	0.24	-0.7
1,979,803	+		BPHYT_RS28640	0.25	+0.8
1,980,103	-		BPHYT_RS28640	0.43	+0.3
1,980,103	-		BPHYT_RS28640	0.43	-1.7
1,980,103	-		BPHYT_RS28640	0.43	-2.5
1,980,948	+				-0.1
1,981,075	+				-1.0
1,981,075	+				+0.8
1,981,505	-		BPHYT_RS28645	0.46	+0.0
1,981,698	+		BPHYT_RS28645	0.65	+1.0
1,981,714	+		BPHYT_RS28645	0.67	-1.2
1,981,844	-		BPHYT_RS28645	0.80	+0.8
1,981,844	-		BPHYT_RS28645	0.80	-0.8
1,981,858	-		BPHYT_RS28645	0.81	-0.3
1,981,890	+		BPHYT_RS28645	0.85	-0.9
1,981,891	-		BPHYT_RS28645	0.85	+0.6
1,981,898	+		BPHYT_RS28645	0.85	-0.3
1,981,900	+		BPHYT_RS28645	0.86	+0.5
1,982,046	+				-1.8