Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27560

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
1,755,230	+		BPHYT_RS27555	0.13	+1.1
1,755,281	+		BPHYT_RS27555	0.21	-0.2
1,755,299	-		BPHYT_RS27555	0.24	+0.9
1,755,352	+		BPHYT_RS27555	0.33	-1.5
1,755,352	+		BPHYT_RS27555	0.33	-1.2
1,755,352	+		BPHYT_RS27555	0.33	+0.2
1,755,506	+		BPHYT_RS27555	0.59	+0.7
1,755,507	-		BPHYT_RS27555	0.59	+0.5
1,755,837	+				-0.1
1,756,216	-		BPHYT_RS27560	0.18	-2.2
1,756,306	-		BPHYT_RS27560	0.26	+0.4
1,757,430	+				+0.9
1,757,595	+		BPHYT_RS27565	0.35	-1.2
1,757,596	-		BPHYT_RS27565	0.36	+1.0
1,757,681	-		BPHYT_RS27565	0.53	+2.4
1,757,795	+		BPHYT_RS27565	0.77	+0.3
1,757,795	+		BPHYT_RS27565	0.77	+0.1
1,757,795	+		BPHYT_RS27565	0.77	-0.1
1,757,813	+		BPHYT_RS27565	0.81	-1.4