Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24360

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
1,029,330	+		BPHYT_RS24350	0.48	-0.7
1,029,585	+		BPHYT_RS24350	0.89	-0.6
1,029,586	-		BPHYT_RS24350	0.89	-1.1
1,029,768	+				-0.8
1,029,996	-				-0.1
1,029,996	-				-0.1
1,030,053	+				-0.4
1,030,054	-				-0.3
1,030,054	-				+0.3
1,030,054	-				-1.7
1,030,122	+				+0.1
1,030,237	+				-0.3
1,030,459	-		BPHYT_RS24360	0.15	+0.4
1,030,522	-		BPHYT_RS24360	0.20	+0.3
1,030,522	-		BPHYT_RS24360	0.20	-1.8
1,030,656	+		BPHYT_RS24360	0.33	-0.8
1,030,817	-		BPHYT_RS24360	0.48	-0.1
1,031,037	+		BPHYT_RS24360	0.68	-0.5
1,031,131	-		BPHYT_RS24360	0.77	+1.2
1,031,131	-		BPHYT_RS24360	0.77	+0.7
1,031,287	-				-0.5
1,031,376	+				+0.7
1,031,481	+				+0.8
1,031,524	-		BPHYT_RS24365	0.11	+0.0
1,031,641	+		BPHYT_RS24365	0.23	-0.2
1,031,641	+		BPHYT_RS24365	0.23	+0.6
1,031,641	+		BPHYT_RS24365	0.23	+1.1
1,031,642	-		BPHYT_RS24365	0.23	-0.7
1,032,118	+		BPHYT_RS24365	0.74	+0.5
1,032,118	+		BPHYT_RS24365	0.74	-1.1
1,032,287	+				+0.1