Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16530

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,745,947	+		BPHYT_RS16520	0.77	+0.7
3,745,973	-		BPHYT_RS16520	0.79	+0.5
3,745,973	-		BPHYT_RS16520	0.79	-0.3
3,745,973	-		BPHYT_RS16520	0.79	+0.0
3,746,237	-				-0.1
3,747,255	+		BPHYT_RS16530	0.52	+0.1
3,747,255	+		BPHYT_RS16530	0.52	-0.1
3,747,266	+		BPHYT_RS16530	0.53	+0.2
3,747,381	+		BPHYT_RS16530	0.65	+0.3
3,747,382	-		BPHYT_RS16530	0.65	+0.3
3,747,382	-		BPHYT_RS16530	0.65	+1.5
3,747,724	+				-0.0
3,747,726	+				+0.7
3,747,727	-				-0.8
3,747,727	-				-0.2
3,747,729	+				-0.2
3,747,737	+				+0.5
3,747,738	-				-0.5
3,747,797	+				-0.0
3,747,797	+				-0.5
3,747,798	-				-2.3
3,747,940	+				-0.1
3,747,940	+				-1.3
3,747,940	+				+0.3
3,747,966	-				-0.7
3,748,369	+		BPHYT_RS16535	0.35	+0.2
3,748,369	+		BPHYT_RS16535	0.35	-0.5
3,748,379	-		BPHYT_RS16535	0.35	-1.2
3,748,379	-		BPHYT_RS16535	0.35	-0.5
3,748,568	-		BPHYT_RS16535	0.49	+0.7
3,748,603	+		BPHYT_RS16535	0.52	-2.5
3,748,651	+		BPHYT_RS16535	0.55	-1.8
3,748,652	-		BPHYT_RS16535	0.55	-0.5
3,748,652	-		BPHYT_RS16535	0.55	+1.3
3,748,652	-		BPHYT_RS16535	0.55	+0.5