Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15520

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,520,212	-				+0.8
3,520,794	+		BPHYT_RS15515	0.50	+0.3
3,520,794	+		BPHYT_RS15515	0.50	-0.6
3,520,862	-		BPHYT_RS15515	0.59	-1.2
3,521,224	+				+0.4
3,521,225	-				-1.5
3,521,423	+		BPHYT_RS15520	0.20	-2.0
3,521,656	-		BPHYT_RS15520	0.41	+1.5
3,521,688	+		BPHYT_RS15520	0.44	-0.3
3,521,732	+		BPHYT_RS15520	0.48	-0.1
3,521,733	-		BPHYT_RS15520	0.48	+0.6
3,521,733	-		BPHYT_RS15520	0.48	-0.9
3,521,736	+		BPHYT_RS15520	0.48	-0.9
3,521,737	-		BPHYT_RS15520	0.48	-2.1
3,521,855	+		BPHYT_RS15520	0.59	+1.5
3,521,856	-		BPHYT_RS15520	0.59	+0.1
3,521,856	-		BPHYT_RS15520	0.59	-0.4
3,521,856	-		BPHYT_RS15520	0.59	-1.5
3,521,909	+		BPHYT_RS15520	0.64	+0.2
3,522,545	-		BPHYT_RS15525	0.27	+0.7
3,522,633	-		BPHYT_RS15525	0.36	-0.6
3,522,634	+		BPHYT_RS15525	0.37	-0.6
3,522,634	+		BPHYT_RS15525	0.37	-0.2
3,522,634	+		BPHYT_RS15525	0.37	-0.4
3,522,634	+		BPHYT_RS15525	0.37	-0.9
3,522,634	+		BPHYT_RS15525	0.37	+0.5
3,522,635	-		BPHYT_RS15525	0.37	-0.1
3,522,832	+		BPHYT_RS15525	0.58	-1.0
3,522,835	+		BPHYT_RS15525	0.59	+0.4
3,522,836	-		BPHYT_RS15525	0.59	-0.1
3,523,250	+				+0.1
3,523,250	+				-0.6