Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15165

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,449,338	-		BPHYT_RS15155	0.34	-2.0
3,449,338	-		BPHYT_RS15155	0.34	-0.2
3,449,349	-		BPHYT_RS15155	0.36	-1.1
3,449,479	-		BPHYT_RS15155	0.55	-0.4
3,449,479	-		BPHYT_RS15155	0.55	-0.4
3,449,491	-		BPHYT_RS15155	0.57	+0.1
3,449,701	+		BPHYT_RS15155	0.87	-0.4
3,449,732	+				-1.3
3,449,732	+				-0.7
3,449,732	+				+0.3
3,449,733	-				-0.5
3,449,892	+		BPHYT_RS15160	0.27	+0.2
3,449,923	+		BPHYT_RS15160	0.34	-0.8
3,449,982	-		BPHYT_RS15160	0.48	+1.0
3,449,982	-		BPHYT_RS15160	0.48	-0.1
3,449,999	+		BPHYT_RS15160	0.52	-1.3
3,450,062	+		BPHYT_RS15160	0.66	+0.6
3,450,104	+		BPHYT_RS15160	0.76	-0.8
3,450,114	-		BPHYT_RS15160	0.78	-1.2
3,450,416	+		BPHYT_RS15165	0.13	-2.5
3,450,663	-		BPHYT_RS15165	0.29	-2.1
3,450,766	+		BPHYT_RS15165	0.35	+0.2
3,451,288	+		BPHYT_RS15165	0.68	-0.7
3,451,564	+		BPHYT_RS15165	0.85	+0.1
3,452,042	+		BPHYT_RS15170	0.15	-1.3
3,452,490	+		BPHYT_RS15170	0.41	+0.0
3,452,491	-		BPHYT_RS15170	0.41	+0.6
3,452,564	+		BPHYT_RS15170	0.45	-1.2