Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15020

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,414,100	-		BPHYT_RS15010	0.62	-1.0
3,414,679	-		BPHYT_RS15015	0.46	-2.0
3,414,852	-				+0.2
3,414,921	-				-1.8
3,415,020	+				-0.7
3,415,020	+				-0.6
3,415,020	+				-0.8
3,415,328	+		BPHYT_RS15020	0.17	-0.3
3,415,329	-		BPHYT_RS15020	0.17	+1.2
3,415,346	+		BPHYT_RS15020	0.18	-1.6
3,415,534	+		BPHYT_RS15020	0.28	+2.3
3,415,791	-		BPHYT_RS15020	0.42	-2.1
3,416,077	+		BPHYT_RS15020	0.58	-1.5
3,416,077	+		BPHYT_RS15020	0.58	-2.1
3,416,078	-		BPHYT_RS15020	0.58	-1.6
3,416,078	-		BPHYT_RS15020	0.58	-0.5
3,416,114	-		BPHYT_RS15020	0.60	-2.7
3,416,342	+		BPHYT_RS15020	0.72	+2.3
3,416,343	-		BPHYT_RS15020	0.72	-0.3
3,416,363	+		BPHYT_RS15020	0.73	-0.4
3,416,669	-		BPHYT_RS15020	0.90	-0.9
3,416,669	-		BPHYT_RS15020	0.90	+0.3
3,416,940	-				-1.9
3,417,011	+				-0.1
3,417,150	-		BPHYT_RS15025	0.14	+0.1
3,417,223	-		BPHYT_RS15025	0.19	-1.8
3,417,224	+		BPHYT_RS15025	0.19	+1.9
3,417,224	+		BPHYT_RS15025	0.19	-1.8
3,417,225	-		BPHYT_RS15025	0.20	-1.3
3,417,441	+		BPHYT_RS15025	0.36	-0.9
3,417,503	+		BPHYT_RS15025	0.41	+0.1
3,417,503	+		BPHYT_RS15025	0.41	+0.6
3,417,503	+		BPHYT_RS15025	0.41	-0.6
3,417,504	-		BPHYT_RS15025	0.41	-0.2
3,417,846	-		BPHYT_RS15025	0.67	+0.1