Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14810

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
3,369,899	-				-1.2
3,369,901	-				+0.1
3,369,901	-				-0.3
3,369,938	+				+0.7
3,369,938	+				+0.9
3,369,938	+				+0.3
3,369,939	-				-0.4
3,369,939	-				+0.0
3,369,939	-				+0.6
3,370,039	-				+0.0
3,370,039	-				+0.0
3,370,039	-				-0.9
3,370,066	+				-1.1
3,370,082	+				-1.0
3,370,082	+				+0.3
3,370,083	-				+0.6
3,370,083	-				+1.5
3,370,095	+				+1.3
3,370,162	-				-0.3
3,370,193	-		BPHYT_RS14810	0.12	+0.5
3,370,193	-		BPHYT_RS14810	0.12	-0.3
3,370,230	+		BPHYT_RS14810	0.17	-1.0
3,370,230	+		BPHYT_RS14810	0.17	+1.3
3,370,554	+		BPHYT_RS14810	0.58	+0.2
3,370,555	-		BPHYT_RS14810	0.58	-0.1
3,370,632	+		BPHYT_RS14810	0.67	+0.4
3,370,633	-		BPHYT_RS14810	0.68	+0.4
3,370,698	+		BPHYT_RS14810	0.76	+2.3
3,370,699	-		BPHYT_RS14810	0.76	-0.2
3,370,699	-		BPHYT_RS14810	0.76	+1.6
3,370,909	+				-0.1
3,370,926	+				-1.3
3,370,927	-				-0.5
3,370,980	-				-0.1
3,370,980	-				+1.0
3,370,980	-				+1.0
3,371,044	-		BPHYT_RS14815	0.18	-0.5
3,371,287	+		BPHYT_RS14815	0.55	+0.3
3,371,287	+		BPHYT_RS14815	0.55	-0.1
3,371,463	+		BPHYT_RS14815	0.82	-1.2
3,371,463	+		BPHYT_RS14815	0.82	+0.7
3,371,464	-		BPHYT_RS14815	0.82	+1.2
3,371,578	+				+3.3
3,371,578	+				+0.2
3,371,578	+				+0.2
3,371,617	+				-0.9