Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS12830

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
2,922,373	+		BPHYT_RS12825	0.76	-0.8
2,922,373	+		BPHYT_RS12825	0.76	-1.4
2,922,508	+				-2.3
2,922,509	-				+0.2
2,922,509	-				-1.0
2,922,624	-				+0.1
2,922,624	-				-1.3
2,922,653	-				+0.1
2,922,690	+				-0.8
2,922,731	-				-0.4
2,922,828	+				-1.3
2,922,871	-				-0.9
2,922,871	-				+1.4
2,923,121	-		BPHYT_RS12830	0.16	+0.5
2,923,191	+		BPHYT_RS12830	0.20	-0.4
2,923,455	+		BPHYT_RS12830	0.35	-0.9
2,923,500	+		BPHYT_RS12830	0.37	+1.4
2,923,501	-		BPHYT_RS12830	0.37	+0.8
2,923,501	-		BPHYT_RS12830	0.37	+1.0
2,923,501	-		BPHYT_RS12830	0.37	+0.2
2,923,501	-		BPHYT_RS12830	0.37	+0.2
2,923,576	-		BPHYT_RS12830	0.42	+1.4
2,923,576	-		BPHYT_RS12830	0.42	+2.7
2,923,576	-		BPHYT_RS12830	0.42	+0.7
2,923,669	-		BPHYT_RS12830	0.47	-0.1
2,923,873	+		BPHYT_RS12830	0.58	+2.0
2,923,874	-		BPHYT_RS12830	0.58	+0.6
2,924,647	-				+1.4
2,924,686	-				+0.4
2,924,686	-				-0.4
2,924,756	-				+0.3
2,924,783	-				-0.3
2,924,811	-				+1.4
2,924,814	-				-0.6
2,924,889	-				+2.4
2,924,889	-				-1.4